Primer sequences were used for reverse transcription-polymerase chain reaction (RT-PCR) and to discriminate human factor H (FH), FH-like-1 (FHL-1), and FH-related protein-1 (FHR-1)
Primer name | Sequence | mRNA target |
---|---|---|
FH short consensus repeat 2 (SCR2) | Forward: AGGCCCTGTGGACATCReverse: AACTTCACATATAGGAATATC | FH and FHL-1, across exons 3–4, SCR2 (5’ end) |
FH exon 9/11 | Forward: CTACTCCCAGATGCATCCGTGTReverse: GGTTGAGCTGACCATCCATCTTT | FH, across exons 9–11 (middle) |
FH SCR20 | Forward: CATCCGTGTGTAATATCCCGReverse: TCTTTTTGCACAAGTTGGATAC | FH, across exons 22–23, SCR20 (3’ end); potentially FHR-1 across exons 5–6 |
FHL-1 | Forward: CATCCGTGTCAGCTTTACCCTReverse: CCATTCTGGCTGGAATAATACAC | FHL-1 unique 4 amino acid tail |
FHR-1 | Forward: GTACTGTGGGCGGATTCACAReverse: CTCTGTTGGGGGAGAAGAAAAATA | FHR-1 A and B, exons 1–4 |
Cyclophilin | Forward: GGCAAATGCTGGACCCAACACAAAReverse: CTAGGCATGGGAGGGAACAAGGAA | Cyclophilin A, housekeeping gene |
Thank you to Dr Sheila Cabezas-Falcon for advice. Thank you to Mr Luke Kris for laboratory assistance.
JGD: Conceptualization, Formal analysis, Investigation, Writing—original draft, Writing—review & editing. BA: Conceptualization, Supervision, Writing—review & editing. EC and VS: Formal analysis, Investigation, Writing—review & editing. DLG: Conceptualization, Funding acquisition, Writing—review & editing. JMC: Conceptualization, Funding acquisition, Supervision, Writing—review & editing. All authors read and approved the submitted version.
The authors declare that they have no conflicts of interest.
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The datasets generated for the mass spectrometry for this study can be found at https://zenodo.org/record/6911339#.YuDXjHZByUl. MP4 digital multimedia images from confocal microscopy are available at https://youtu.be/C7wO1RE_wdw and https://youtu.be/mjwsZh8lshU.
This study was supported by funding from the Flinders Foundation. JGD is supported by a scholarship from the Australian Government Research Training Program. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
© The Author(s) 2024.