Summary of molecular pathology markers in MB
Gene | Status | MB subtypes | Prognosis | References |
---|---|---|---|---|
CTNNB1 | Mutation | WNT | Good | [19] |
PTCH1/SMO | Mutation | SHH | Dependent on TP53 | [3, 16, 23] |
SUFU | Germline mutation | SHH | Poor | [28] |
TP53 | Mutation | WNT | Good | [3, 21, 29] |
SHH | poor | [3, 13, 21, 29] | ||
DDX3X | Mutation | WNT, SHH | Unknown | [13, 40, 41] |
CREBBP | Mutation | SHH | Unknown | [40, 42] |
MLL2 | Mutation | WNT, SHH | Unknown | [44, 45] |
MLL3 | Mutation | WNT, SHH | Unknown | [44, 45] |
TERT | Promoter mutation | WNT | Unaffected | [46] |
Group 3 | ||||
SHH | Good | [47] | ||
Group 4 | Poor | [48] | ||
MYC | Amplification | Group 3 | Poor | [51–53] |
Post-translational modifications | Group 3 | Poor | [96] | |
MYCN | Amplification | SHH | Poor | [23, 52, 55, 56] |
Group 4 | Unknown | [57] | ||
OTX2 | Amplification | WNT, non-WNT/non-SHH | Unknown | [62–64] |
CDK6 | Amplification | All groups | Poor | [13, 48, 67] |
PTEN | Loss | SHH | poor | [51, 70] |
Group 4 | Unknown | [70] | ||
KDM6A | Copy number loss | non-WNT/non-SHH | Unknown | [40] |
Mutation | SHH, non-WNT/non-SHH | [13, 23, 72] | ||
KBTBD4 | Insertion | non-WNT/non-SHH | Unknown | [25, 48, 49, 74] |
GLI2 | Amplification | SHH | Poor | [23, 25, 80] |
Chromosome 11 | Loss | Group 4 | Good | [56, 82] |
Chromosome 17 | iso 17q | Group 3 | Poor | [54, 57, 60] |
Gain | Group 4 | Good | [56, 82] | |
TNRC6C | DNA methy | All groups | Poor | [84] |
MXI1 | DNA methy | Non-WNT | Poor | [87] |
IL8 | DNA methy | Non-WNT | Poor | [87] |
Lmx1A | Enhancer activation | Group 4 | Poor | [89] |
PRDM6 | Enhancer hijacking | Group 4 | Unknown | [25] |
GFI1 | Transcriptional activation | non-WNT/non-SHH | Unknown | [13, 25, 92] |
GFI1B | Transcriptional activation | non-WNT/non-SHH | Unknown | [13, 25, 92] |
ERBB4 | Post-transcriptional regulation | Group 4 | Poor | [94] |
methy: methylation